cosmicfishpie package

Subpackages

• cosmicfishpie.CMBsurvey package
  • Submodules
  • cosmicfishpie.CMBsurvey.CMB_cov module
    • CMBCov
      • CMBCov.compute_covmat()
      • CMBCov.compute_derivs()
      • CMBCov.get_covmat()
      • CMBCov.getcls()
      • CMBCov.getclsnoise()
      • CMBCov.sum_inv_squares()
  • cosmicfishpie.CMBsurvey.CMB_obs module
    • ComputeCls
      • ComputeCls.compute_all()
      • ComputeCls.computecls()
      • ComputeCls.print_numerical_specs()
  • Module contents
• cosmicfishpie.LSSsurvey package
  • Submodules
  • cosmicfishpie.LSSsurvey.photo_cov module
    • PhotoCov
      • PhotoCov.compute_covmat()
      • PhotoCov.compute_derivs()
      • PhotoCov.get_covmat()
      • PhotoCov.getcls()
      • PhotoCov.getclsnoise()
  • cosmicfishpie.LSSsurvey.photo_obs module
    • ComputeCls
      • ComputeCls.P_limber()
      • ComputeCls.clsintegral()
      • ComputeCls.compute_all()
      • ComputeCls.compute_kernels()
      • ComputeCls.computecls()
      • ComputeCls.galaxy_kernel()
      • ComputeCls.genwindow()
      • ComputeCls.integral_efficiency()
      • ComputeCls.lensing_efficiency()
      • ComputeCls.lensing_kernel()
      • ComputeCls.print_numerical_specs()
      • ComputeCls.sqrtP_limber()
    • faster_integral_efficiency()
    • memo_integral_efficiency()
  • cosmicfishpie.LSSsurvey.photo_window module
    • GalaxyPhotoDist
      • GalaxyPhotoDist.dNdz()
      • GalaxyPhotoDist.n_i()
      • GalaxyPhotoDist.ngal_photoz()
      • GalaxyPhotoDist.norm()
      • GalaxyPhotoDist.norm_ngal_photoz()
  • cosmicfishpie.LSSsurvey.spectro_cov module
    • SpectroCov
      • SpectroCov.P_noise_21()
      • SpectroCov.Tsys_func()
      • SpectroCov.cov()
      • SpectroCov.d_volume()
      • SpectroCov.n_density()
      • SpectroCov.veff()
      • SpectroCov.veff_21cm()
      • SpectroCov.veff_XC()
      • SpectroCov.volume_bin()
      • SpectroCov.volume_survey()
    • SpectroDerivs
      • SpectroDerivs.compute_derivs()
      • SpectroDerivs.dlnpobs_dcosmop()
      • SpectroDerivs.dlnpobs_dnuisp()
      • SpectroDerivs.dlnpobs_dp()
      • SpectroDerivs.exact_derivs()
      • SpectroDerivs.get_obs()
      • SpectroDerivs.initialize_obs()
      • SpectroDerivs.kronecker_bins()
  • cosmicfishpie.LSSsurvey.spectro_obs module
    • ComputeGalIM
      • ComputeGalIM.Omega_HI()
      • ComputeGalIM.Temperature()
      • ComputeGalIM.alpha_SD()
      • ComputeGalIM.beta_SD()
      • ComputeGalIM.lnpobs_IM()
      • ComputeGalIM.observed_P_HI()
      • ComputeGalIM.set_IM_specs()
      • ComputeGalIM.theta_b()
    • ComputeGalSpectro
      • ComputeGalSpectro.BAO_term()
      • ComputeGalSpectro.FingersOfGod()
      • ComputeGalSpectro.P_ThetaTheta_Moments()
      • ComputeGalSpectro.activate_terms()
      • ComputeGalSpectro.bterm_fid()
      • ComputeGalSpectro.dewiggled_pdd()
      • ComputeGalSpectro.k_units_change()
      • ComputeGalSpectro.kaiserTerm()
      • ComputeGalSpectro.kmu_alc_pac()
      • ComputeGalSpectro.kpar()
      • ComputeGalSpectro.kper()
      • ComputeGalSpectro.lnpobs_gg()
      • ComputeGalSpectro.normalized_pdd()
      • ComputeGalSpectro.normalized_pnw()
      • ComputeGalSpectro.observed_Pgg()
      • ComputeGalSpectro.qparallel()
      • ComputeGalSpectro.qperpendicular()
      • ComputeGalSpectro.set_internal_kgrid()
      • ComputeGalSpectro.set_spectro_specs()
      • ComputeGalSpectro.sigmapNL()
      • ComputeGalSpectro.sigmavNL()
      • ComputeGalSpectro.spec_err_z()
  • Module contents
• cosmicfishpie.analysis package
  • Submodules
  • cosmicfishpie.analysis.colors module
    • bash_colors
      • bash_colors.blue()
      • bash_colors.bold()
      • bash_colors.fail()
      • bash_colors.green()
      • bash_colors.header()
      • bash_colors.underline()
      • bash_colors.warning()
      • bash_colors.BOLD
      • bash_colors.ENDC
      • bash_colors.FAIL
      • bash_colors.HEADER
      • bash_colors.OKBLUE
      • bash_colors.OKGREEN
      • bash_colors.UNDERLINE
      • bash_colors.WARNING
    • nice_colors()
  • cosmicfishpie.analysis.fisher_derived module
    • fisher_derived
      • fisher_derived.add_derived()
      • fisher_derived.get_derived_matrix()
      • fisher_derived.get_derived_param_fiducial()
      • fisher_derived.get_derived_param_names()
      • fisher_derived.get_derived_param_names_latex()
      • fisher_derived.get_param_fiducial()
      • fisher_derived.get_param_names()
      • fisher_derived.get_param_names_latex()
      • fisher_derived.load_paramnames_from_file()
  • cosmicfishpie.analysis.fisher_matrix module
    • fisher_matrix
      • fisher_matrix.__add__()
      • fisher_matrix.__eq__()
      • fisher_matrix.__ne__()
      • fisher_matrix.PCA()
      • fisher_matrix.check_symmetric()
      • fisher_matrix.determinant()
      • fisher_matrix.get_confidence_bounds()
      • fisher_matrix.get_fiducial()
      • fisher_matrix.get_fisher_eigenvalues()
      • fisher_matrix.get_fisher_eigenvectors()
      • fisher_matrix.get_fisher_inverse()
      • fisher_matrix.get_fisher_matrix()
      • fisher_matrix.get_param_fiducial()
      • fisher_matrix.get_param_index()
      • fisher_matrix.get_param_name()
      • fisher_matrix.get_param_name_latex()
      • fisher_matrix.get_param_names()
      • fisher_matrix.get_param_names_latex()
      • fisher_matrix.get_param_number()
      • fisher_matrix.inverse_fisher_matrix()
      • fisher_matrix.load_paramnames_from_file()
      • fisher_matrix.make_symmetric()
      • fisher_matrix.protect_degenerate()
      • fisher_matrix.save_paramnames_to_file()
      • fisher_matrix.save_to_file()
      • fisher_matrix.set_fiducial()
      • fisher_matrix.set_fisher_matrix()
      • fisher_matrix.set_param_names()
      • fisher_matrix.set_param_names_latex()
      • fisher_matrix.translate_param_names()
  • cosmicfishpie.analysis.fisher_operations module
    • eliminate_columns_rows()
    • eliminate_parameters()
    • information_gain()
    • marginalise()
    • marginalise_over()
    • reshuffle()
  • cosmicfishpie.analysis.fisher_plot_analysis module
    • CosmicFish_FisherAnalysis
      • CosmicFish_FisherAnalysis.add_fisher_matrix()
      • CosmicFish_FisherAnalysis.compute_ellipse()
      • CosmicFish_FisherAnalysis.compute_gaussian()
      • CosmicFish_FisherAnalysis.compute_plot_range()
      • CosmicFish_FisherAnalysis.delete_fisher_matrix()
      • CosmicFish_FisherAnalysis.get_fisher_list()
      • CosmicFish_FisherAnalysis.get_fisher_matrix()
      • CosmicFish_FisherAnalysis.get_fisher_name_list()
      • CosmicFish_FisherAnalysis.get_parameter_latex_names()
      • CosmicFish_FisherAnalysis.get_parameter_list()
      • CosmicFish_FisherAnalysis.marginalise()
      • CosmicFish_FisherAnalysis.reshuffle()
      • CosmicFish_FisherAnalysis.search_fisher_path()
  • cosmicfishpie.analysis.fisher_plotting module
    • fisher_plotting
      • fisher_plotting.compare_errors()
      • fisher_plotting.get_FoM()
      • fisher_plotting.load_gaussians()
      • fisher_plotting.matrix_ratio()
      • fisher_plotting.param_limits_bounds()
      • fisher_plotting.plot_fisher()
      • fisher_plotting.read_fisher_matrices()
  • cosmicfishpie.analysis.plot_comparison module
    • add_colorbar()
    • calc_y_range()
    • matrix_plot()
    • og_plot_shades()
    • plot_shades()
    • ploterrs()
    • process_fish_errs()
  • cosmicfishpie.analysis.utilities module
    • CosmicFish_write_header()
    • confidence_coefficient()
    • find_nearest()
    • grouper()
    • make_list()
    • mant_exp_to_num()
    • mkdirp()
    • nice_number()
    • num_to_mant_exp()
    • print_table()
    • rel_median_error()
    • significant_digits()
  • Module contents
• cosmicfishpie.cosmology package
  • Submodules
  • cosmicfishpie.cosmology.cosmology module
    • boltzmann_code
      • boltzmann_code.camb_results()
      • boltzmann_code.camb_setparams()
      • boltzmann_code.changebasis_camb()
      • boltzmann_code.changebasis_class()
      • boltzmann_code.class_results()
      • boltzmann_code.class_setparams()
      • boltzmann_code.print_camb_params()
      • boltzmann_code.print_class_params()
      • boltzmann_code.rescale_LP()
      • boltzmann_code.set_cosmicfish_defaults()
      • boltzmann_code.hardcoded_Neff
      • boltzmann_code.hardcoded_neutrino_mass_fac
    • cosmo_functions
      • cosmo_functions.E_hubble()
      • cosmo_functions.Hubble()
      • cosmo_functions.Omegam_of_z()
      • cosmo_functions.Pcb()
      • cosmo_functions.Pmm()
      • cosmo_functions.SigmaMG()
      • cosmo_functions.angdist()
      • cosmo_functions.cmb_power()
      • cosmo_functions.comoving()
      • cosmo_functions.f_growthrate()
      • cosmo_functions.fsigma8_of_z()
      • cosmo_functions.growth()
      • cosmo_functions.matpow()
      • cosmo_functions.nonwiggle_pow()
      • cosmo_functions.sigma8_of_z()
      • cosmo_functions.c
    • external_input
      • external_input.calculate_interpol_results()
      • external_input.get_param_string_from_value()
      • external_input.load_txt_files()
  • cosmicfishpie.cosmology.nuisance module
    • Nuisance
      • Nuisance.IA()
      • Nuisance.IM_THI_noise()
      • Nuisance.IM_bias()
      • Nuisance.IM_bias_at_zm()
      • Nuisance.IM_zbins()
      • Nuisance.IM_zbins_mids()
      • Nuisance.bterm_z_key()
      • Nuisance.extra_Pshot_noise()
      • Nuisance.gcph_bias()
      • Nuisance.gcsp_bias()
      • Nuisance.gcsp_bias_at_zm()
      • Nuisance.gcsp_dndz()
      • Nuisance.gcsp_zbins()
      • Nuisance.gcsp_zbins_mids()
      • Nuisance.luminosity_ratio()
  • Module contents
• cosmicfishpie.fishermatrix package
  • Submodules
  • cosmicfishpie.fishermatrix.config module
    • init()
    • settings
    • external
    • input_type
    • specs
    • boltzmann_classpars
    • boltzmann_cambpars
    • survey_equivalence
    • obs
    • freeparams
    • fiducialparams
    • fiducialcosmo
    • biasparams
    • photoparams
    • IAparams
    • PShotparams
    • Spectrobiasparams
    • Spectrononlinearparams
    • IMbiasparams
    • latex_names
  • cosmicfishpie.fishermatrix.cosmicfish module
    • FisherMatrix
      • FisherMatrix.CMB_fishermatrix()
      • FisherMatrix.compute()
      • FisherMatrix.compute_binned_derivs()
      • FisherMatrix.eliminate_zbinned_freepars()
      • FisherMatrix.export_fisher()
      • FisherMatrix.fish_integrand()
      • FisherMatrix.fisher_calculation()
      • FisherMatrix.fisher_integral()
      • FisherMatrix.fisher_per_bin()
      • FisherMatrix.photo_LSS_fishermatrix()
      • FisherMatrix.pk_LSS_Fisher()
      • FisherMatrix.recap_options()
      • FisherMatrix.set_pk_settings()
      • FisherMatrix.cf_version
    • ray_session()
  • cosmicfishpie.fishermatrix.derivatives module
    • derivatives
      • derivatives.der_3pt_stencil()
      • derivatives.der_fwd_4pt()
      • derivatives.derivative_3pt()
      • derivatives.derivative_forward_4pt()
      • derivatives.derivative_poly()
      • derivatives.derivative_stem()
  • Module contents
• cosmicfishpie.utilities package
  • Submodules
  • cosmicfishpie.utilities.utils module
    • filesystem
      • filesystem.git_version()
      • filesystem.mkdirp()
    • inputiniparser
      • inputiniparser.free_epsilons()
    • numerics
      • numerics.bisection()
      • numerics.closest()
      • numerics.find_nearest()
      • numerics.moving_average()
      • numerics.round_decimals_up()
    • printing
      • printing.debug_print()
      • printing.time_print()
      • printing.debug
  • Module contents

Submodules

cosmicfishpie.version module

Module contents